Showing posts with label candidate genes. Show all posts
Showing posts with label candidate genes. Show all posts
Wednesday, August 25, 2010
ADRB2 polymorphism and athletic performance
Wednesday, August 18, 2010
Genetic evidence of local adaptation in humans
Nice Ann Gibbons article on local adaptation in humans, including variants associated with how
"highland Tibetans survive at high altitude. Others allow Yupik Eskimos to stay warm efficiently, Europeans to thrive on cereal grains, and, perhaps, East Asians avoid alcoholism."
eik, a "gene for" pain
New paper in Genome Research:
Cacng2 -- "a gene that seems to contribute to chronic pain in a mouse model of human disorders such as phantom limb pain"
Wednesday, August 11, 2010
the "not-missing heredity" of morphological variation in dogs
New PLoSBio paper: >900dogs of 80 breeds (+wild), 61k SNPs and morphological measurements --> relatively few loci explain the majority of phenotypic (morphological) variation
(thanks Dieter!)
Labels:
candidate genes,
dog,
genotype-phenotype,
Ostrander
Wednesday, September 16, 2009
HuGE Navigator
This site will be useful for looking up candidate genes: a "searchable knowledge base of genetic associations" (thanks Sameer!)
Sunday, September 13, 2009
recent positive selection on genes associated with/linked to male pattern baldness
From the paper (AGA = pattern baldness):
Interestingly, it is the AGA risk haplotype that
shows evidence for positive selection in the European
population. The AGA risk haplotype also carries a derived
non-synonymous allele (57K) in the flanking ectodysplasin
A2 receptor gene (EDA2R). The 57K allele may have been
the target of positive selection in East Asians: it shows
large allele frequency diverences between populations,
lies in a likely functional domain of the
EDA2R protein, and the ancestral allele, 57R, is conserved
from human to rat. Thus, the AGA risk haplotype may have
hitchhiked to high frequency in Europeans as a result of
positive selection on the linked 57K allele in EDA2R
Interestingly, it is the AGA risk haplotype that
shows evidence for positive selection in the European
population. The AGA risk haplotype also carries a derived
non-synonymous allele (57K) in the flanking ectodysplasin
A2 receptor gene (EDA2R). The 57K allele may have been
the target of positive selection in East Asians: it shows
large allele frequency diverences between populations,
lies in a likely functional domain of the
EDA2R protein, and the ancestral allele, 57R, is conserved
from human to rat. Thus, the AGA risk haplotype may have
hitchhiked to high frequency in Europeans as a result of
positive selection on the linked 57K allele in EDA2R
Labels:
androgen,
baldness,
candidate genes,
curly hair,
stoneking
Saturday, August 29, 2009
more interesting candidate genes: size, longevity, behavioral stereotypes
Candidate genes associated with size, longevity, and behavioral stereotypes of dogs (New Scientist seems esp interested in high strung chihuahuas)
Thursday, August 27, 2009
genetics of dog hair (length and curl)
new Science Express paper from Ostrander lab: Variation in dog coat phenotypes largely due to mutations at just 3 genes (RSPO2, FGF5, and KRT71).
This is exciting -- for several reasons!
here is an NPR snippet about the article (thanks for tip, Monica):
Labels:
candidate genes,
coat,
curly hair,
dog,
hair growth,
hair length,
Ostrander
Wednesday, August 19, 2009
sleep genes
I think I might have fixed the links problem...
I'll test it with this science article (tip from Jason) on the DEC2 gene and the evolution of sleep
-- surely some diurnal vs cathemeral vs nocturnal projects there...
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